Publications

Journal Papers

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2023

Danilov, V.V., Kolpashchikov, D.Y., Gerget, O.M., Laptev, N.V., Proutski, A., Hernández Gómez, L.A., Alvarez, F., Ledesma-Carbayo, M.J. "Use of semi-synthetic data for catheter segmentation improvement". Comput. Med. Imaging Graph., 106:102188. Jun. 2023 (doi: 10.1016/j.compmedimag.2023.102188).
Niso, G., Romero, E., Moreau, J.T., Araujo, A., Krol, L.R. "Wireless EEG: A survey of systems and studies". Neuroimage, 269:119774. Apr. 2023 (doi: 10.1016/j.neuroimage.2022.119774).
Farina, B., Ramos Guerra, A.D., Bermejo-Peláez, D., Palacios Miras, C., Alcazar Peral, A., Gallardo Madueño, G., Corral Jaime, J., Vilalta-Lacarra, A., Rubio Pérez, J., Muñoz-Barrutia, A., Peces-Barba, G.R., Seijo Maceiras, L., Gil-Bazo, I., Dómine Gómez, M., Ledesma-Carbayo, M.J. "Integration of longitudinal deep-radiomics and clinical data improves the prediction of durable benefits to anti-PD-1/PD-L1 immunotherapy in advanced NSCLC patients". J. Transl. Med., 21:174. Mar. 2023 (doi: 10.1186/s12967-023-04004-x).
Cordero-Grande, L., Ortuño-Fisac, J.E., del Hoyo, A.A., Uus, A., Deprez, M., Santos, A., Hajnal, J.V., Ledesma-Carbayo, M.J. "Fetal MRI by Robust Deep Generative Prior Reconstruction and Diffeomorphic Registration". IEEE Trans. Med. Imaging, 42(3):810-822. Mar. 2023 (doi: 10.1109/TMI.2022.3217725).

2022

Arenal, Á., Ríos-Muñoz, G.R., Carta-Bergaz, A., Ruiz-Hernández, P.M., Pérez-David, E., Crisóstomo, V., Loughlin, G., Sanz-Ruiz, R., Fernández-Portales, J., Acosta, A., Báez-Díaz, C., Blanco-Blázquez, V., Ledesma-Carbayo, M.J., Pareja, M., Fernández-Santos, M.E., Sánchez-Margallo, F.M., Casado, J.G., Fernández-Avilés, F. "Effects of Cardiac Stem Cell on Postinfarction Arrhythmogenic Substrate". Int. J. Mol. Sci., 23(24):16211. Dec. 2022 (doi: 10.3390/ijms232416211).
Alfano, F., Cordero-Grande, L., Ortuño, J.E., Ferreres García, K., García-Sevilla, M., Bueno Zamora, O., Herrero Conde, M., Lizarraga, S., Santos, A., Pascau, J., Ledesma-Carbayo, M.J. "Breast Tumor Localization by Prone to Supine Landmark Driven Registration for Surgical Planning". IEEE Access, 10:122901-122911. Nov. 2022 (doi: 10.1109/ACCESS.2022.3223658).
Carta-Bergaz, A., Ríos-Muñoz, G.R., Crisóstomo, V., Sánchez-Margallo, F.M., Ledesma-Carbayo, M.J., Bermejo-Thomas, J., Fernández-Avilés, F., Arenal-Maíz, Á. "Intrapericardial cardiosphere-derived cells hinder epicardial dense scar expansion and promote electrical homogeneity in a porcine post-infarction model". Front. Physiol., 13:1041348. Nov. 2022 (doi: 10.3389/fphys.2022.1041348).
Niso, G., Botvinik-Nezer, R., Appelhoff, S., De La Vega, A., Esteban, O., Etzel, J.A., Finc, K., Ganz, M., Gau, R., Halchenko, Y.O., Herholz, P., Karakuzu, A., Keator, D.B., Markiewicz, C.J., Maumet, C., Pernet, C.R., Pestilli, F., Queder, N., Schmitt, T., Sójka, W., Wagner, A.S., Whitaker, K.J., Rieger, J.W. "Open and reproducible neuroimaging: from study inception to publication". Neuroimage, 263:119623. Nov. 2022 (doi: 10.1016/j.neuroimage.2022.119623).
Manohar, A., Colvert, G.M., Ortuño, J.E., Chen, Z., Yang, J., Colvert, B.T., Bandettini, W.P., Chen, M.Y., Ledesma-Carbayo, M.J., McVeigh, E.R. "Regional left ventricular endocardial strains estimated from low-dose 4DCT: Comparison with cardiac magnetic resonance feature tracking". Med. Phys., 49(9):5841-5854. Sep. 2022 (doi: 10.1002/mp.15818).
Rodriguez-Valero, N., Ledesma Carbayo, M.J., Camprubí-Ferrer, D., Martí-Soler, H., Cuadrado Sanchez, D., Vladimirov, A., Pinazo, M.J., Almuedo-Riera, A., Roman, A., Vera, I., Roldan, M., de Alba, T., Jimenez, A., Gómez-Valverde, J.J., Luengo Oroz, M., Muñoz, J. "Telemedicine for international travelers through a Smartphone-based monitoring platform (Trip Doctor®)". Travel Med. Infect. Dis., 49:102356. Sep. 2022 (doi: 10.1016/j.tmaid.2022.102356).
Lautarescu, A., Bonthrone, A. F., Pietsch, M., Batalle, D., Cordero-Grande, L., Tournier, J.-D., Christiaens, D., Hajnal, J.V., Chew, A., Falconer, S., Nosarti, C., Victor, S., Craig, M.C., Edwards, A.D., Counsell, S.J. "Maternal depressive symptoms, neonatal white matter, and toddler social-emotional development". Transl. Psychiatr., 12:323. Aug. 2022 (doi: 10.1038/s41398-022-02073-y).
Bonthrone, A.F., Chew, A., Bhroin, M.N., Morassutti Rech, F., Kelly, C.J., Christiaens, D., Pietsch, M., Tournier, J.-D., Cordero-Grande, L., Price, A., Egloff, A., Hajnal, J.V., Pushparajah, K., Simpson, J., Edwards, A.D., Rutherford, M.A., Nosarti, C., Batalle, D., Counsell, S.J. "Neonatal frontal-limbic connectivity is associated with externalizing behaviours in toddlers with Congenital Heart Disease". NeuroImage-Clin., 36:103153. Aug. 2022 (doi: 10.1016/j.nicl.2022.103153).
Manohar, A., Colvert, G.M., Yang, J., Chen, Z., Ledesma-Carbayo, M.J., Kronborg, M.B., Sommer, A., Nørgaard, B.L., Nielsen, J.C., McVeigh, E.R. "Prediction of Cardiac Resynchronization Therapy Response Using a Lead Placement Score Derived from 4-Dimensional Computed Tomography". Circ.-Cardiovasc. Imaging, 15(8):e014165. Aug. 2022 (doi: 10.1161/CIRCIMAGING.122.014165).
Taoudi-Benchekroun, Y., Christiaens, D., Grigorescu, I., Gale-Grant, O., Schuh, A., Pietsch, M., Chew, A., Harper, N., Falconer, S., Poppe, T., Hughes, E., Hutter, J., Price, A.N., Tournier, J.-D., Cordero-Grande, L., Counsell, S.J., Rueckert, D., Arichi, T., Hajnal, J.V., Edwards, A.D., Deprez, M., Batalle, D. "Predicting age and clinical risk from the neonatal connectome". Neuroimage, 257:119319. Aug. 2022 (doi: 10.1016/j.neuroimage.2022.119319).
Niso, G., Krol, L.R., Combrisson, E., Dubarry, S., Elliott, M.A., François, C., Héjja-Brichard, Y., Herbst, S.K., Jerbi, K., Kovic, V., Lehongre, K., Luck, S.J., Mercier, M., Mosher, J.C., Pavlov, Y.G., Puce, A., Schettino, A., Schön, D., Sinnott-Armstrong, W., Somon, B., Šoškić, A., Styles, S.J., Tibon, R., Vilas, M.G., van Vliet, M., Chaumon, M. "Good scientific practice in EEG and MEG research: Progress and perspectives". Neuroimage, 257:119056. Aug. 2022 (doi: 10.1016/j.neuroimage.2022.119056).
Brackenier, Y., Cordero-Grande, L., Tomi-Tricot, R., Wilkinson, T., Bridgen, P., Price, A., Malik, S.J., De Vita, E., Hajnal, J.V. "Data-driven motion-corrected brain MRI incorporating pose-dependent B₀ fields". Magn. Reson. Med., 88(2):817-831. Aug. 2022 (doi: 10.1002/mrm.29255).
Bermejo-Peláez, D., San José Estépar, R., Fernández-Velilla, M., Palacios Miras, C., Gallardo Madueño, G., Benegas, M., Gotera Rivera, C., Cuerpo, S., Luengo-Oroz, M., Sellarés, J., Sánchez, M., Bastarrika, G., Peces Barba, G., Seijo, L.M., Ledesma-Carbayo, M.J. "Deep learning-based lesion subtyping and prediction of clinical outcomes in COVID-19 pneumonia using chest CT". Sci Rep, 12:9387. Jun. 2022 (doi: 10.1038/s41598-022-13298-8).
Ciarrusta, J., Christiaens, D., Fitzgibbon, S.P., Dimitrova, R., Hutter, J., Hughes, E., Duff, E., Price, A.N., Cordero-Grande, L., Tournier, J.-D., Rueckert, D., Hajnal, J.V., Arichi, T., McAlonan, G., Edwards, A.D., Batalle, D. "The developing brain structural and functional connectome fingerprint". Dev. Cogn. Neurosci., 55:101117. Jun. 2022 (doi: 10.1016/j.dcn.2022.101117).
Edwards, A.D., Rueckert, D., Smith, S.M., Seada, S.A., Alansary, A., Almalbis, J., Allsop, J., Andersson, J., Arichi, T., Arulkumaran, S., Bastiani, M., Batalle, D., Baxter, L., Bozek, J., Braithwaite, E., Brandon, J., Carney, O., Chew, A., Christiaens, D., Chung, R., Colford, K., Cordero-Grande, L., Counsell, S.J., Cullen, H., Cupitt, J., Curtis, C., Davidson, A., Deprez, M., Dillon, L., Dimitrakapoulou, K., Dimitrova, R., Duff, E., Falconer, S., Farahibozorg, S.-R., Fitzgibbon, S.P., Gao, J., Gaspar, A., Harper, N., Harrison, S.J., Hughes, E.J., Hutter, J., Jenkinson, M., Jbabdi, S., Jones, E., Karolis, V., Kyriakopoulou, V., Lenz, G., Makropoulos, A., Malik, S., Mason, L., Mortari, F., Nosarti, C., Nunes, R.G., O'Keeffe, C., O'Muircheartaigh, J., Patel, H., Passerat-Palmbach, J., Pietsch, M., Price, A.N., Robinson, E.C., Rutherford, M.A., Schuh, A., Sotiropoulos, S., Steinweg, J., Teixeira, R.P.A.G., Tenev, T., Tournier, J.-D., Tusor, N., Uus, A., Vecchiato, K., Williams, L.Z.J., Wright, R., Wurie, J., Hajnal, J.V. "The Developing Human Connectome Project Neonatal Data Release". Front. Neurosci., 16:886772. May 2022 (doi: 10.3389/fnins.2022.886772).
García Delgado, L., Postigo, M., Cuadrado, D., Gil-Casanova, S., Martínez Martínez, Á., Linares, M., Merino, P., Gimo, M., Blanco, S., Bassat, Q., Santos, A., García-Basteiro, A.L., Ledesma-Carbayo, M.J., Luengo-Oroz, M.A. "Remote analysis of sputum smears for mycobacterium tuberculosis quantification using digital crowdsourcing". PLoS One, 17(5):e0268494. May 2022 (doi: 10.1371/journal.pone.0268494).
Fenchel, D., Dimitrova, R., Robinson, E.C., Batalle, D., Chew, A., Falconer, S., Kyriakopoulou, V., Nosarti, C., Hutter, J., Christiaens, D., Pietsch, M., Brandon, J., Hughes, E.J., Allsop, J., O'Keeffe, C., Price, A.N., Cordero-Grande, L., Schuh, A., Makropoulos, A., Passerat-Palmbach, J., Bozek, J., Rueckert, D., Hajnal, J.V., McAlonan, G., Edwards, A.D., O'Muircheartaigh, J. "Neonatal multi-modal cortical profiles predict 18-month developmental outcomes". Dev. Cogn. Neurosci., 54:101103. Apr. 2022 (doi: 10.1016/j.dcn.2022.101103).
Gale-Grant, O., Fenn-Moltu, S., França, L.G.S., Dimitrova, R., Christaens, D., Cordero-Grande, L., Chew, A., Falconer, S., Harper, N., Price, A.N., Hutter, J., Hughes, E., O'Muircheartaigh, J., Rutherford, M., Counsell, S.J., Rueckert, D., Nosarti, C., Hajnal, J.V., McAlonan, G., Arichi, T., Edwards, A.D., Batalle, D. "Effects of gestational age at birth on perinatal structural brain development in healthy term-born babies". Hum. Brain Mapp., 43(5):1577-1589. Apr. 2022 (doi: 10.1002/hbm.25743).

2021

Dimitrova, R., Pietsch, M., Ciarrusta, J., Fitzgibbon, S.P., Williams, L.Z.J., Christiaens, D., Cordero-Grande, L., Batalle, D., Makropoulos, A., Schuh, A., Price, A.N., Hutter, J., Teixeira, R.P.A.G., Hughes, E., Chew, A., Falconer, S., Carney, O., Egloff, A., Tournier, J.-D., McAlonan, G., Rutherford, M.A., Counsell, S.J., Robinson, E.C., Hajnal, J.V., Rueckert, D., Edwards, A.D., O'Muircheartaigh, J. "Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age". Neuroimage, 243:118488. Nov. 2021 (doi: 10.1016/j.neuroimage.2021.118488).
García-Villena, J., Torres, J.E., Aguilar, C., Lin, L., Bermejo-Peláez, D., Dacal, E., Mousa, A., Ortega, M.P., Martínez, A., Vladimirov, A., Cuadrado, D., Postigo, M., Ordi, J., Bassat, Q., Salamanca, J., Rodriguez-Peralto, J.L., Linares, M., Ortuño, J.E., Ledesma-Carbayo, M.J., Santos, A., Luengo-Oroz, M. "3D-Printed Portable Robotic Mobile Microscope for Remote Diagnosis of Global Health Diseases". Electronics, 10(19):2408. Oct. 2021 (doi: 10.3390/electronics10192408).
Merino-Caviedes, S., Gutierrez, L.K., Alfonso-Almazán, J.M., Sanz-Estébanez, S., Cordero-Grande, L., Quintanilla, J.G., Sánchez-González, Marina-Breysse, Galán-Arriola, C., Enríquez-Vázquez, D., Torres, C., Pizarro, G., Ibáñez, B., Peinado, R., Merino, J.L., Pérez-Villacastín, J., Jalife, J., López-Yunta, M., Vázquez, M., Aguado-Sierra, J., González-Ferrer, J.J., Pérez-Castellano, N., Martín Fernández, M., Alberola-López, C., Filgueiras-Rama, D. "Time-efficient three-dimensional transmural scar assessment provides relevant substrate characterization for ventricular tachycardia features and long-term recurrences in ischemic cardiomyopathy". Sci Rep, 11:18722. Sep. 2021 (doi: 10.1038/s41598-021-97399-w).
Dacal, E., Bermejo-Peláez, D., Lin, L., Álamo, E., Cuadrado, D., Martínez, Á., Mousa, A., Postigo, M., Soto, A., Sukosd, E., Vladimirov, A., Mwandawiro, C., Gichuki, P., Williams, N.A., Muñoz, J., Kepha, S., Luengo-Oroz, M. "Mobile microscopy and telemedicine platform assisted by deep learning for the quantification of Trichuris trichiura infection". Plos Neglect. Trop. Dis., 15(9):e0009677. Sep. 2021 (doi: 10.1371/journal.pntd.0009677).
Carney, O., Hughes, E., Tusor, N., Dimitrova, R., Arulkumaran, S., Baruteau, K.P., Collado, A.E., Cordero-Grande, L., Chew, A., Falconer, S., Allsop, J.M., Rueckert, D., Hajnal, J.V., Edwards, A.D., Rutherford, M. "Incidental findings on brain MR imaging of asymptomatic term neonates in the Developing Human Connectome Project". EClinicalMedicine, 38:100984. Aug. 2021 (doi: 10.1016/j.eclinm.2021.100984).
Dimitrova, D., Arulkumaran, A., Carney, O., Chew, A., Falconer, S., Ciarrusta, J., Wolfers, T., Batalle, D., Cordero-Grande, L., Price, A.N., Teixeira, R.P.A.G., Hughes, E., Egloff, A., Hutter, J., Makropoulos, A., Robinson, E.C., Schuh, A., Vecchiato, K., Steinweg, J.K., Macleod, R., Marquand, A.F., McAlonan, G., Rutherford, M.A., Counsell, S.J., Smith, S.M., Rueckert, D., Hajnal, J.V., O'Muircheartaigh, J., Edwards, A.D. "Phenotyping the Preterm Brain: Characterizing Individual Deviations From Normative Volumetric Development in Two Large Infant Cohorts". Cereb. Cortex, 31(8):3665-3677. Aug. 2021 (doi: 10.1093/cercor/bhab039).
Pradillo, J.M., Hernández-Jiménez, M., Fernández-Valle, M.E., Medina, V., Ortuño, J.E., Allan, S.M., Proctor, S.D., Garcia-Segura, J.M., Ledesma-Carbayo, M.J., Santos, A., Moro, M.A., Lizasoain, I. "Influence of metabolic syndrome on post-stroke outcome, angiogenesis and vascular function in old rats determined by dynamic contrast enhanced MRI". J. Cereb. Blood Flow Metab., 41(7):1692-1706. Jul. 2021 (doi: 10.1177/0271678X20976412).
Marino, M., Cordero-Grande, L., Mantini, D., Ferrazzi, G. "Conductivity Tensor Imaging of the Human Brain Using Water Mapping Techniques". Front. Neurosci., 15:694645. Jul. 2021 (doi: 10.3389/fnins.2021.694645).
Gómez-Valverde, J.J., Sinz, C., Rank, E.A., Chen, Z., Santos, A., Drexler, W., Ledesma-Carbayo, M.J. "Adaptive compounding speckle-noise-reduction filter for optical coherence tomography images". J. Biomed. Opt., 26(6):065001. Jun. 2021 (doi: 10.1117/1.JBO.26.6.065001).
Uus, A., Grigorescu, I., Pietsch, M., Batalle, D., Christiaens, D., Hughes, E., Hutter, J., Cordero Grande, L., Price, A.N., Tournier, J.-D., Rutherford, M.A., Counsell, S.J., Hajnal, J.V., Edwards, A.D., Deprez, M. "Multi-Channel 4D Parametrized Atlas of Macro- and Microstructural Neonatal Brain Development". Front. Neurosci., 15:661704. Jun. 2021 (doi: 10.3389/fnins.2021.661704).
Carrasco-Gómez, M., Keijzer, H.M., Ruijter, B.J., Bruña, R., Tjepkema-Cloostermans, M.C., Hofmeijer, J., van Putten, M.J.A.M. "EEG functional connectivity contributes to outcome prediction of postanoxic coma". Clin. Neurophysiol., 132(6):1312-1320. Jun. 2021 (doi: 10.1016/j.clinph.2021.02.011).
Wilson, S., Pietsch, M., Cordero-Grande, L., Price, A.N., Hutter, J., Xiao, J., McCabe, L., Rutherford, M.A., Hughes, E.J., Counsell, S.J., Tournier, J.-D., Arichi, T., Hajnal, J.V., Edwards, A.D., Christiaens, D., O'Muircheartaigh, J. "Development of human white matter pathways in utero over the second and third trimester". Proc. Natl. Acad. Sci., 118(20):e2023598118. May 2021 (doi: 10.1073/pnas.2023598118).
Grigorescu, I., Vanes, L., Uus, A., Batalle, D., Cordero-Grande, L., Nosarti, C., Edwards, A.D., Hajnal, J.V., Modat, M., Deprez, M. "Harmonized Segmentation of Neonatal Brain MRI". Front. Neurosci., 15:662005. May 2021 (doi: 10.3389/fnins.2021.662005).
Vecchiato, K., Egloff, A., Carney, O., Siddiqui, A., Hughes, E., Dillon, L., Colford, K., Green, E., Texeira, R.P.A.G., Price, A.N., Ferrazzi, G., Hajnal, J.V., Carmichael, D.W., Cordero-Grande, L., O'Muircheartaigh, J. "Evaluation of DISORDER: Retrospective Image Motion Correction for Volumetric Brain MRI in a Pediatric Setting". Am. J. Neuroradiol., 42(4):774-781. Apr. 2021 (doi: 10.3174/ajnr.A7001).
Bonthrone, A.F., Dimitrova, R., Chew, A., Kelly, C.J., Cordero-Grande, L., Carney, O., Egloff, A., Hughes, E., Vecchiato, K., Simpson, J., Hajnal, J.V., Pushparajah, K., Victor, S., Nosarti, C., Rutherford, M.A., Edwards, A.D., O'Muircheartaigh, J., Counsell, S.J. "Individualized brain development and cognitive outcome in infants with congenital heart disease". Brain Commun., 3(2):fcab046. Mar. 2021 (doi: 10.1093/braincomms/fcab046).
Christiaens, D., Cordero-Grande, L., Pietsch, M., Hutter, J., Price, A.N., Hughes, E.J., Vecchiato, K., Deprez, M., Edwards, A.D., Hajnal, J.V., Tournier, J.-D. "Scattered slice SHARD reconstruction for motion correction in multi-shell diffusion MRI". Neuroimage, 225:117437. Jan. 2021 (doi: 10.1016/j.neuroimage.2020.117437).

2020

Colvert, G.M., Ortuño, J.E., Bandettini, W.P., Chen, M.Y., Ledesma-Carbayo, M.J., McVeigh, E.R. "4DCT-Derived Endocardial Left Ventricular Torsion Correlates With CMR Tagging-Derived Torsion in the Same Subjects". JACC-Cardiovasc. Imag., 13(12):2677-2678. Dec. 2020 (doi: 10.1016/j.jcmg.2020.05.022).
Núñez, L.M., Romero, E., Julià-Sapé, M., Ledesma-Carbayo, M.J., Santos, A., Arús, C., Candiota, A.P., Vellido, A. "Unraveling response to temozolomide in preclinical GL261 glioblastoma with MRI/MRSI using radiomics and signal source extraction". Sci Rep, 10:19699. Nov. 2020 (doi: 10.1038/s41598-020-76686-y).
Ferrazzi, G., Bassenge, J.P., Mayer, J., Ruh, A., Roujol, S., Ittermann, B., Schaeffter, T., Cordero-Grande, L., Schmitter, S. "Autocalibrated cardiac tissue phase mapping with multiband imaging and k-t acceleration". Magn. Reson. Med., 84(5):2429-2441. Nov. 2020 (doi: 10.1002/mrm.28288).
Ortuño, J.E., Vegas-Sánchez-Ferrero, G., Gómez-Valverde, J.J., Chen, M.Y., Santos, A., McVeigh, E.R., Ledesma-Carbayo, M.J. "Automatic estimation of aortic and mitral valve displacements in dynamic CTA with 4D graph-cuts". Med. Image Anal., 65:101748. Oct. 2020 (doi: 10.1016/j.media.2020.101748).
Bhroin, M.N, Seada, S.A., Bonthrone, A.F., Kelly, C.J., Christiaens, D., Schuh, A., Pietsch, M., Hutter, J., Tournier, J.-D., Cordero-Grande, L., Rueckert, D., Hajnal, J.V., Pushparajah, K., Simpson, J., Edwards, A.D., Rutherford, M.A., Counsell, S.J., Batalle, D. "Reduced structural connectivity in cortico-striatal-thalamic network in neonates with congenital heart disease". NeuroImage-Clin., 28:102423. Sep. 2020 (doi: 10.1016/j.nicl.2020.102423).
Ng, I.H.X., Bonthrone, A.F., Kelly, C.J., Cordero-Grande, L., Hughes, E.J., Price, A.N., Hutter, J., Victor, S., Schuh, A., Rueckert, D., Hajnal, J.V., Simpson, J., Edwards, A.D., Rutherford, M.A., Batalle, D., Counsell, S.J. "Investigating altered brain development in infants with congenital heart disease using tensor-based morphometry". Sci Rep, 10:14909. Sep. 2020 (doi: 10.1038/s41598-020-72009-3).
Dimitrova, R., Pietsch, M., Christiaens, D., Ciarrusta, J., Wolfers, T., Batalle, D., Hughes, E., Hutter, J., Cordero-Grande, L., Price, A.N., Chew, A., Falconer, S., Vecchiato, K., Steinweg, J.K., Carney, O., Rutherford, M.A., Tournier, J-D. Counsell, S.J., Marquand, A.F., Rueckert, D., Hajnal, J.V., McAlonan, G., Edwards, A.D., O'Muircheartaigh, J. "Heterogeneity in Brain Microstructural Development Following Preterm Birth". Cereb. Cortex, 30(9):4800-4810. Sep. 2020 (doi: 10.1093/cercor/bhaa069).
Goswami, S.S., Ortuño, J.E., Santos, A., Calvo, F.A., Pascau, J., Ledesma-Carbayo, M.J. "A New Workflow for Image-Guided Intraoperative Electron Radiotherapy Using Projection-Based Pose Tracking". IEEE Access, 8:137501-137516. Jul. 2020 (doi: 10.1109/ACCESS.2020.3011915).
Diez-Delhoyo, F., Sanz-Ruiz, R., Perez-David, E., Gutierrez-Ibañes, E., González-Saldivar, H., Ledesma-Carbayo, M.J., Vazquez-Alvarez, M.E., Gonzalez-Mansilla, A., Soriano, J., Quiroz-Burgos, J.A., Elizaga, J., Prieto-Arevalo, R., Espinosa, M.A., Martínez-Legazpi, P., Bermejo, J., Fernandez-Aviles, F. "Long-Term LV Characterization Using CMR in Patients With Spontaneous Coronary Artery Dissection". JACC-Cardiovasc. Imag., 13(6):1441-1442. Jun. 2020 (doi: 10.1016/j.jcmg.2019.11.024).
Bermejo-Peláez, D., Ash, S.Y., Washko, G.R., San José Estépar, R., Ledesma-Carbayo, M.J. "Classification of Interstitial Lung Abnormality Patterns with an Ensemble of Deep Convolutional Neural Networks". Sci Rep, 10:338. Jan. 2020 (doi: 10.1038/s41598-019-56989-5).
García-Vázquez, V., Calvo, F.A., Ledesma-Carbayo, M.J., Sole, C.V., Calvo-Haro, J., Desco, M., Pascau, J. "Intraoperative computed tomography imaging for dose calculation in intraoperative electron radiation therapy: initial clinical observations". PLoS One, 15(1):e0227155. Jan. 2020 (doi: 10.1371/journal.pone.0227155).

2019

Müller, F., Niso, G., Samiee, S., Ptito, M., Baillet, S., Kupers, R. "A thalamocortical pathway for fast rerouting of tactile information to occipital cortex in congenital blindness". Nat. Commun., 10:5154. Nov. 2019 (doi: 10.1038/s41467-019-13173-7).
Xifra-Porxas, A., Niso, G., Larivière, S., Kassinopoulos, M., Baillet, S., Mitsis, G.D., Boudrias, M.-H. "Older adults exhibit a more pronounced modulation of beta oscillations when performing sustained and dynamic handgrips". Neuroimage, 201:116037. Nov. 2019 (doi: 10.1016/j.neuroimage.2019.116037).
Matarazzo, M., Arroyo-Gallego, T., Montero, P., Puertas-Martín, V., Butterworth, I., Mendoza, C.S., Ledesma-Carbayo, M.J., Catalán, M.J., Molina, J.A., Bermejo-Pareja, F., Martínez-Castrillo, J.C., López-Manzanares, L., Alonso-Cánovas, A., Herreros Rodríguez, J., Obeso, I., Martínez Martín, P., Martínez-Ávila, J.C., Gómez de la Cámara, A., Gray, M., Obeso, J.A., Giancardo, L., Sánchez-Ferro, Á. "Remote Monitoring of Treatment Response in Parkinson's Disease: The Habit of Typing on a Computer". Mov. Disord., 34(10):1488-1495. Oct. 2019 (doi: 10.1002/mds.27772).
Pablo-Trinidad, A., Butterworth, I., Ledesma-Carbayo, M.J., Vettenburg, T., Sánchez-Ferro, A., Soenksen, L., Durr, N.J., Muñoz-Barrutia, A., Cerrato, C., Humala, K., Fabra Urdiol, M., Del Rio, C., Valles, B., Chen, Y.-B., Hochberg, E.P., Castro-González, C., Bourquard, A. "Automated detection of neutropenia using noninvasive video microscopy of superficial capillaries". Am. J. Hematol., 94(8):E219-E222. Aug. 2019 (doi: 10.1002/ajh.25516).
Vegas-Sánchez-Ferrero, G., Ledesma-Carbayo, M.J., Washko, G.R., San José Estépar, R. "Harmonization of chest CT scans for different doses and reconstructions methods". Med. Phys., 46(7):3117-3132. Jul. 2019 (doi: 10.1002/mp.13578). Editor's choice.
Chholak, P., Niso, G., Maksimenko, V.A., Kurkin, S.A., Frolov, N.S., Pitsik, E.N., Hramov, A.E., Pisarchik, A.N. "Visual and kinesthetic modes affect motor imagery classification in untrained subjects". Sci Rep, 9:9838. Jul. 2019 (doi: 10.1038/s41598-019-46310-9).
Larivière, S., Xifra-Porxas, A., Kassinopoulos, M., Niso, G., Baillet, S., Mitsis, G.D., Boudrias, M.-H. "Functional and effective reorganization of the aging brain during unimanual and bimanual hand movements". Hum. Brain Mapp., 40(10):3027-3040. Jul. 2019 (doi: 10.1002/hbm.24578).
Niso, G., Tadel, F., Bock, E., Cousineau, M., Santos, A., Baillet, S. "Brainstorm Pipeline Analysis of Resting-State Data from the Open MEG Archive". Front. Neurosci., 13:284. Apr. 2019 (doi: 10.3389/fnins.2019.00284).
Vidal, M., Ibáñez, P., Guerra, P., Valdivieso-Casique, M.F., Rodríguez, R., Illana, C., Udías, J.M. "Fast optimized Monte Carlo phase-space generation and dose prediction for low energy x-ray intra-operative radiation therapy". Phys. Med. Biol., 64(7):075002. Apr. 2019 (doi: 10.1088/1361-6560/ab03e7).
Gkontra, P., El-Bouri, W.K., Norton, K.-A., Santos, A., Popel, A.S., Payne, S.J., Arroyo, A.G. "Dynamic Changes in Microvascular Flow Conductivity and Perfusion after Myocardial Infarction Shown by Image-Based Modeling". J. Am. Heart Assoc., 8:e011058. Apr. 2019 (doi: 10.1161/JAHA.118.011058).
Gómez-Valverde, J.J., Antón, A., Fatti, G., Liefers, B., Herranz, A., Santos, A., Sánchez, C.I., Ledesma-Carbayo, M.J. "Automatic glaucoma classification using color fundus images based on convolutional neural networks and transfer learning". Biomed. Opt. Express, 10(2):892-913. Feb. 2019 (doi: 10.1364/BOE.10.000892).
Tadel, F., Bock, E., Niso, G., Mosher, J.C., Cousineau, M., Pantazis, D., Leahy, R.M., Baillet, S. "MEG/EEG Group Analysis With Brainstorm". Front. Neurosci., 13:76. Feb. 2019 (doi: 10.3389/fnins.2019.00076).
Jimenez-Carretero, D., Bermejo-Peláez, D., Nardelli, P., Fraga, P., Fraile, E., San José Estépar, R., Ledesma-Carbayo, M.J. "A Graph-Cut Approach for Pulmonary Artery-Vein Segmentation in Noncontrast CT Images". Med. Image Anal., 52:144-159. Feb. 2019 (doi: 10.1016/j.media.2018.11.011).
Linares, M., Postigo, M., Cuadrado, D., Ortiz-Ruiz, A., Gil-Casanova, S., Vladimirov, A., García-Villena, J., Nuñez-Escobedo, J.M., Martínez-López, J., Rubio, J.M., Ledesma-Carbayo, M.J., Santos, A., Bassat, Q., Luengo-Oroz, M. "Collaborative Intelligence and Gamification for On-Line Malaria Species Differentiation". Malar. J., 18:21. Jan. 2019 (doi: 10.1186/s12936-019-2662-9).

2018

Aja-Fernández, S., Pieciak, T., Tristán-Vega, A., Vegas-Sánchez-Ferrero, G., Molina, V., Luis-García, R. "Scalar diffusion-MRI measures invariant to acquisition parameters: A first step towards imaging biomarkers". Magn. Reson. Imaging, 54:194-213. Dec. 2018 (doi: 10.1016/j.mri.2018.03.001).
Ramos-Llordén, G., Vegas-Sánchez-Ferrero, G., Björk, M., Vanhevel, F., Parizel, P.M., San José Estépar, R., den Dekker, A.J., Sijbers, J. "NOVIFAST: A Fast Algorithm for Accurate and Precise VFA MRI T₁ Mapping". IEEE Trans. Med. Imaging, 37(11):2414-2427. Nov. 2018 (doi: 10.1109/TMI.2018.2833288).
Nardelli, P., Jimenez-Carretero, D., Bermejo-Pelaez, D., Washko, G.R., Rahaghi, F.N., Ledesma-Carbayo, M.J., San José Estépar, R. "Pulmonary Artery-Vein Classification in CT Images Using Deep Learning". IEEE Trans. Med. Imaging, 37(11):2428-2440. Nov. 2018 (doi: 10.1109/TMI.2018.2833385).
Rodriguez-Valero, N., Luengo Oroz, M., Cuadrado Sanchez, D., Vladimirov, A., Espriu, M., Vera, I., Sanz, S., Gonzalez Moreno, J.L., Muñoz, J., Ledesma Carbayo, M.J. "Mobile based surveillance platform for detecting Zika virus among Spanish Delegates attending the Rio de Janeiro Olympic Games". PLoS One, 13(9):e0201943. Ago. 2018 (doi: 10.1371/journal.pone.0201943).
Rodriguez-Valero, N., Ledesma Carbayo, M.J., Cuadrado Sanchez, D., Vladimirov, A., Espriu, M., Vera, I., Roldan, M., de Alba, T., Sanz, S., Gonzalez Moreno, J.L., Luengo Oroz, M., Muñoz, J. "Real-time incidence of travel-related symptoms through a smartphone-based app remote monitoring system: a pilot study". J. Travel Med., 25(1):tay034. Jul. 2018 (doi: 10.1093/jtm/tay034).
Zufiria, P.J., Pastor-Escuredo, D., Úbeda-Medina, L., Hernandez-Medina, M.A., Barriales-Valbuena, I., Morales, A.J., Jacques, D.C., Nkwambi, W., Bamba Diop, M., Quinn, J., Hidalgo-Sanchís, P., Luengo-Oroz, M. "Identifying seasonal mobility profiles from anonymized and aggregated mobile phone data. Application in food security". PLoS One, 13(4):e0195714. Apr. 2018 (doi: 10.1371/journal.pone.0195714).
Bourquard, A., Pablo-Trinidad, A., Butterworth, I., Sánchez-Ferro, A., Cerrato Canales, C., Humala, K., Fabra Urdiola, M., Del Rio, C., Valles, B., Tucker-Schwartz, J.M., Lee, E.S., Vakoc, B.J., Padera, T.P., Ledesma-Carbayo, M.J., Chen, Y.-B., Hochberg, E.P., Gray, M.L., Castro-González, C. "Non-invasive Detection of Severe Neutropenia in Chemotherapy Patients by Optical Imaging of Nailfold Microcirculation". Sci Rep, 8:5301. Mar. 2018 (doi: 10.1038/s41598-018-23591-0).
Arroyo-Gallego, T., Ledesma-Carbayo, M.J., Butterworth, I., Matarazzo, M., Montero-Escribano, P., Puertas-Martín, V., Gray, M.L., Giancardo, L., Sánchez-Ferro, Á. "Detecting Motor Impairment in Early Parkinson's Disease via Natural Typing Interaction with Keyboards: Validation of the neuroQWERTY Approach in an Uncontrolled At-Home Setting". J. Med. Internet Res., 20(3):e89. Mar. 2018 (doi: 10.2196/jmir.9462).
Vegas-Sánchez-Ferrero, G., Ledesma-Carbayo, M.J., Washko, G.R., San José Estépar, R. "Autocalibration Method for Non-stationary CT Bias Correction". Med. Image Anal., 44:115-125. Feb. 2018 (doi: 10.1016/j.media.2017.12.004).
Ortiz-Ruiz, A., Postigo, M., Gil-Casanova, S., Cuadrado, D., Bautista, J.M., Rubio, J.M., Luengo-Oroz, M., Linares, M. "Plasmodium species differentiation by non-expert on-line volunteers for remote malaria field diagnosis". Malar. J., 17:54. Jan. 2018 (doi: 10.1186/s12936-018-2194-8).
Gkontra, P., Norton, K.-A., Żak, M.M., Clemente, C., Agüero, J., Ibáñez, B., Santos, A., Popel, A.S., Arroyo, A.G. "Deciphering microvascular changes after myocardial infarction through 3D fully automated image analysis". Sci Rep, 8:1854. Jan. 2018 (doi: 10.1038/s41598-018-19758-4).

2017

Pieciak, T., Aja-Fernández, S., Vegas-Sánchez-Ferrero, G. "Non-Stationary Rician Noise Estimation in Parallel MRI Using a Single Image: A Variance-Stabilizing Approach". IEEE Trans. Pattern Anal. Mach. Intell., 39(10):2015-2029. Oct. 2017 (doi: 10.1109/TPAMI.2016.2625789).
Arroyo-Gallego, T., Ledesma-Carbayo, M.J., Sánchez-Ferro, Á., Butterworth, I., Mendoza, C.S., Matarazzo, M., Montero, P., López-Blanco, R., Puertas-Martín, V., Trincado, R., Giancardo, L. "Detection of Motor Impairment in Parkinson's Disease Via Mobile Touchscreen Typing". IEEE Trans. Biomed. Eng., 64(9):1994-2002. Sep. 2017 (doi: 10.1109/TBME.2017.2664802).
Pontré, B., Cowan, B.R., DiBella, E., Kulaseharan, S., Likhite, D., Noorman, N., Tautz, L., Tustison, N., Wollny, G., Young, A.A., Suinesiaputra, A. "An Open Benchmark Challenge for Motion Correction of Myocardial Perfusion MRI". IEEE J. Biomed. Health Inform., 21(5):1315-1326. Sep. 2017 (doi: 10.1109/JBHI.2016.2597145).
García-Vázquez, V., Marinetto, E., Guerra, P., Valdivieso-Casique, M.F., Calvo, F.Á., Alvarado-Vásquez, E., Sole, C.V., Vosburgh, K.G., Desco, M., Pascau, J. "Assessment of intraoperative 3D imaging alternatives for IOERT dose estimation". Z. Med. Phys., 27(3):218-231. Sep. 2017 (doi: 10.1016/j.zemedi.2016.07.002).
Vegas-Sánchez-Ferrero, G., Ledesma-Carbayo, M.J., Washko, G.R., San José Estépar, R. "Statistical Characterization of Noise for Spatial Standardization of CT Scans: Enabling Comparison with Multiple Kernels and Doses". Med. Image Anal., 40:44-59. Aug. 2017 (doi: 10.1016/j.media.2017.06.001).
Rahaghi, F.N., Vegas-Sanchez-Ferrero, G., Minhas, J.K., Come, C.E., De La Bruere, I., Wells, J.M., González, G., Bhatt, S.P., Fenster, B.E., Diaz, A.A., Kohli, P., Ross, J.C., Lynch, D.A., Dransfield, M.T., Bowler, R.P., Ledesma-Carbayo, M.J., San José Estépar, R., Washko, G.R., the COPDGene Investigators. "Ventricular Geometry from Non-contrast Non-ECG-gated CT Scans: An Imaging Marker of Cardiopulmonary Disease in Smokers". Acad. Radiol., 24(5):594-602. May 2017 (doi: 10.1016/j.acra.2016.12.007).
Niknejad, T., Pizzichemi, M., Stringhini, G., Auffray, E., Bugalho, R., Da Silva, J.C., Di Francesco, A., Ferramacho, L., Lecoq, P., Leong, C., Paganoni, M., Rolo, M., Silva, R., Silveira, M., Tavernier, S., Varela, J., Zorraquino, C. "Development of High-Resolution Detector Module with Depth of Interaction Identification for Positron Emission Tomography". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 845:684-688. Feb. 2017 (doi: 10.1016/j.nima.2016.04.080).

2016

Niknejad, T., Setayeshi, S., Tavernier, S., Bugalho, R., Ferramacho, L., Di Francesco, A., Leong, C., Rolo, M.D., Shamshirsaz, M., Silva, J.C., Silva, R., Silveira, M., Zorraquino, C., Varela, J. "Validation of a highly integrated SiPM readout system with a TOF-PET demonstrator". J. Instrum., 11:P12003. Dec. 2016 (doi: 10.1088/1748-0221/11/12/P12003).
Esteban, O., Zosso, D., Daducci, A., Bach-Cuadra, M., Ledesma-Carbayo, M.J., Thiran, J-P., Santos, A. "Surface-driven registration method for the structure-informed segmentation of diffusion MR images". Neuroimage, 139:450-461. Oct. 2016 (doi: 10.1016/j.neuroimage.2016.05.011).
Giancardo, L., Sánchez-Ferro, A., Arroyo-Gallego, T., Butterworth, I., Mendoza, C.S., Montero, P., Matarazzo, M., Obeso, J.A., Gray, M.L., San José Estépar, R. "Computer keyboard interactions as an indicator of early Parkinson's disease". Sci Rep, 6:34468. Oct. 2016 (doi: 10.1038/srep34468).
Esteban, O., Zosso, D., Daducci, A., Bach-Cuadra, M., Ledesma-Carbayo, M.J., Thiran, J-P., Santos, A. "Data on the verification and validation of segmentation and registration methods for diffusion MRI". Data Brief, 8:871-876. Sep. 2016 (doi: 10.1016/j.dib.2016.06.049).
González-Jaime, L., Vegas-Sánchez-Ferrero, G., Kerre, E.E., Aja-Fernández, S. "Spatially-variant noise filtering in magnetic resonance imaging: A consensus-based approach". Knowledge-Based Syst., 106:264-273. Aug. 2016 (doi: 10.1016/j.knosys.2016.05.053).
Curiale, A.H., Vegas-Sánchez-Ferrero, G., Aja-Fernández, S. "Influence of ultrasound speckle tracking strategies for motion and strain estimation". Med. Image Anal., 32:184-200. Aug. 2016 (doi: 10.1016/j.media.2016.04.002).
Rossini, L., Martinez-Legazpi, P., Vu, V., Fernández-Friera, L., Perez del Villar, C., Rodríguez-López, S., Benito, Y., Borja, M-G., Pastor-Escuredo, D., Yotti, R., Ledesma-Carbayo, M.J., Kahn, A.M., Ibanez, B., Fernández-Avilés, F., May-Newman, K., Bermejo, J., del Álamo, J.C. "A Clinical Method for Mapping and Quantifying Blood Stasis in the Left Ventricle". J. Biomech., 49(11):2152-2161. Jul. 2016 (doi: 10.1016/j.jbiomech.2015.11.049).
Kumamaru, K.K., George, E., Aghayev, A., Saboo, S.S., Khandelwal, A., Rodríguez-López, S., Cai, T., Jiménez-Carretero, D., Estépar, R.S.J., Ledesma-Carbayo, M.J., González, G., Rybicki, F.J. "Implementation and Performance of Automated Software for Computing Right-to-Left Ventricular Diameter Ratio From Computed Tomography Pulmonary Angiography Images". J. Comput. Assist. Tomogr., 40(3):387-392. May/Jun. 2016 (doi: 10.1097/RCT.0000000000000375).
Zorraquino, C., Bugalho, R., Rolo, M., Silva, J.C., Vecklans, V., Silva, R., Ortigão, C.; Neves, J.A., Tavernier, S., Guerra, P., Santos, A., Varela, J. "Asymmetric Data Acquisition System for an Endoscopic PET-US Detector". IEEE Trans. Nucl. Sci., 63(1):213-221. Feb. 2016 (doi: 10.1109/TNS.2016.2514600).
Esteban, O., Caruyer, E., Daducci, A., Bach-Cuadra, M., Ledesma-Carbayo, M.J., Santos, A. "Diffantom: whole-brain diffusion MRI phantoms derived from real datasets of the Human Connectome Project". Front. Neuroinformatics, 10:4. Feb. 2016 (doi: 10.3389/fninf.2016.00004)
Jimenez-Carretero, D., San Jose Estepar, R., Diaz Cacio, M., Ledesma-Carbayo, M.J. "Automatic Synthesis of Anthropomorphic Pulmonary CT Phantoms". PLoS One, 11(1):e0146060. Jan. 2016 (doi: 10.1371/journal.pone.0146060).

2015

Guerra, P., Valverde, J.J., Martin, A., Ledesma, M.J., Rubio-Guivernau, J.L., Santos, A. "Real Time Signal Processing and Data Handling with dedicated hardware in handheld OCT Device". J. Instrum., 10(11):C11001. Nov. 2015 (doi: 10.1088/1748-0221/10/11/C11001).
Ávila, P., Pérez-David, E., Izquierdo, M., Rojas-González, A., Sánchez-Gómez, J.M., Ledesma-Carbayo, M.J., López-Lereu, M.P., Loughlin, G., Monmeneu, J.V., González-Torrecilla, E., Atienza, F., Datino, T., Bravo, L., Bermejo, J., Fernández-Avilés, F., Ruíz-Granel, R., Arenal, A. "Scar Extension Measured by Magnetic Resonance–Based Signal Intensity Mapping Predicts Ventricular Tachycardia Recurrence After Substrate Ablation in Patients With Previous Myocardial Infarction". JACC-Clin. Electrophysiol., 1(5):353-365. Oct. 2015 (doi: 10.1016/j.jacep.2015.07.006). Editorial Comment.
Ding, H., Fernandez-de-Manuel, L., Schär, M., Schuleri, K.H., Halperin, H., He, L., Zviman, M.M., Beinart, R., Herzka, D.A. "Three-Dimensional Whole-Heart T₂ Mapping at 3T". Magn. Reson. Med., 74(3):803-816. Sep. 2015 (doi: 10.1002/mrm.25458).
Curiale, A.H., Vegas-Sánchez-Ferrero, G., Bosch, J.G., Aja-Fernández, S. "A Maximum Likelihood Approach to Diffeomorphic Speckle Tracking for 3D Strain Estimation in Echocardiography". Med. Image Anal., 24(1):90-105. Aug. 2015 (doi: 10.1016/j.media.2015.05.001).
Pérez del Villar, C., Bermejo, J., Rodríguez-Pérez, D., Martínez-Legazpi, P., Benito, Y., Antoranz, J.C., Desco, M.M., Ortuño, J.E., Barrio, A., Mombiela, T., Yotti, R., Ledesma-Carbayo, M.J., Del Álamo, J.C., Fernández-Avilés, F. "The Role of Elastic Restoring Forces in Right Ventricular Filling". Cardiovasc. Res., 107(1):45-55. Jun. 2015 (doi: 10.1093/cvr/cvv047). Editor's choice.
Haak, A., Vegas-Sánchez-Ferrero, G., Mulder, H.W., Ren, B., Kirişli, H.A., Metz, C., van Burken, G., van Stralen, M., Pluim, J.P.W., van der Steen, A.F.W., van Walsum, T., Bosch, J.G. "Segmentation of Multiple Heart Cavities in 3-D Transesophageal Ultrasound Images". IEEE Trans. Ultrason. Ferroelectr. Freq. Control, 62(6):1179-1189. Jun. 2015 (doi: 10.1109/TUFFC.2013.006228).
González, G., Jiménez-Carretero, D., Rodríguez-López, S., Kumamaru, K.K., George, E., San José Estépar, R., Rybicki, F.J., Ledesma-Carbayo, M.J. "Automated Axial Right Ventricle to Left Ventricle Diameter Ratio Computation in Computed Tomography Pulmonary Angiography". PLoS One, 10(5):e0127797. May 2015 (doi: 10.1371/journal.pone.0127797).
Simões, R.V., Ortuño, J.E., Bokacheva, L., Candiota, A.P., Ledesma-Carbayo, M.J., Delgado-Goñi, T., García-Martín, M.L., Santos, A., Arús, C. "Effect of acute hyperglycemia on moderately hypothermic GL261 mouse glioma monitored by T1-weighted DCE MRI". Magn. Reson. Mat. Phys. Biol. Med., 28(2):119-126. Apr. 2015 (doi: 10.1007/s10334-014-0447-2).
Valdivieso-Casique, M.F., Rodríguez, R., Rodríguez-Bescós, S., Lardíes, D., Guerra, P., Ledesma, M.J., Santos, A., Ibáñez, P., Vidal, M., Udías, J.M., Otaduy, M.A., Calama, J.A., López-Tarjuelo, J., Santos-Miranda, J.A., Desco, M., García-Vázquez, V., Marinetto, E., Pascau, J., Calvo, F., Illana, C. "RADIANCE—A planning software for intra-operative radiation therapy". Transl Cancer Res, 4(2):196-209. Apr. 2015 (doi: 10.3978/j.issn.2218-676X.2015.04.05).
Herranz, E., Herraiz, J.L., Ibáñez, P., Pérez-Liva, M., Puebla, R., Cal-González, J., Guerra, P., Rodríguez, R., Illana, C., Udías, J. "Phase space determination from measured dose data for intraoperative electron radiation therapy". Phys. Med. Biol., 60(1):375-401. Jan. 2015 (doi: 10.1088/0031-9155/60/1/375).
Petitjean, C., Zuluaga, M.A., Bai, W., Dacher, J-N., Grosgeorge, D., Caudron, J., Ruan, S., Ayed, I.B., Jorge Cardoso, M., Chen, H-C., Jimenez-Carretero, D., Ledesma-Carbayo, M.J., Davatzikos, C., Doshi, J., Erus, G., Maier, O.M.O., Nambakhsh, C.M.S., Ou, Y., Ourselin, S., Peng, C-W., Peters, N.S., Peters, T.M., Rajchl, M., Rueckert, D., Santos, A., Shi, W., Wang, C-W., Wang, H., Yuan, J., "Right Ventricle Segmentation From Cardiac MRI: A Collation Study". Med. Image Anal., 19(1):187-202. Jan. 2015 (doi: 10.1016/j.media.2014.10.004).

2014

Guerra, P., Udias, J.M., Herranz, E., Santos-Miranda, J., Herraiz, J., Valdivieso, M., Rodríguez, R., Calama, J., Pascau, J., Calvo, F., Illana, C., Ledesma-Carbayo, M.J., Santos, A. "Feasibility Assessment of the Interactive Use of a Monte Carlo Algorithm in Treatment Planning for Intraoperative Electron Radiation Therapy". Phys. Med. Biol., 59(23):7159-7179. Dec. 2014 (doi: 10.1088/0031-9155/59/23/7159).
Wollny, G., Kellman, P. "Free breathing myocardial perfusion data sets for performance analysis of motion compensation algorithms". GigaScience, 3:23. Nov. 2014 (doi: 10.1186/2047-217X-3-23).
Marti-Fuster, B., Esteban, O., Thielemans, K., Setoain, X., Santos, A., Ros, D., Pavia, J. "Including Anatomical and Functional Information in MC Simulation of PET and SPECT Brain Studies. Brain-VISET: A Voxel-Based Iterative Method". IEEE Trans. Med. Imaging, 33(10):1931-1938. Oct. 2014 (doi: 10.1109/TMI.2014.2326041).
Rudyanto, R.D., Kerkstra, S., van Rikxoort, E.M., Fetitac, C., Brillet, P.-Y., Lefevre, C., Xue, W., Zhu, X., Liang, J., Öksüz, I., Ünay, D., Kadipasaoglu, K., San José Estépar, R., Ross, J.C., Washko, G.R., Prieto, J.C., Hernández Hoyos, M., Orkisz, M., Meine, H., Hüllebrand, M., Stöcker, C., Lopez Mir, F., Naranjo, V., Villanueva, E., Staring, M., Xiao, C., Stoel, B.C., Fabijanska, A., Smistad, E., Elster, A.C., Lindseth, F., Hossein Foruzan, A., Kiros, R., Popuri, K., Cobzas, D., Jimenez-Carretero, D., Santos, A., Ledesma-Carbayo, M.J., Helmberger, M., Urschler, M., Pienn, M., Bosboom, D.G.H., Campo, A., Prokop, M., de Jong, P.A., Ortiz-de-Solorzano, C., Muñoz-Barrutia, A., van Ginneken, B. "Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: The VESSEL12 study". Med. Image Anal., 18(7):1217-1232. Oct. 2014 (doi: 10.1016/j.media.2014.07.003).
Arenal, A., Pérez-David, E., Ávila, P., Fernández-Portales, J., Crisóstomo, V., Báez, C., Jiménez-Candil, J., Rubio-Guivernau, J.L., Ledesma-Carbayo, M.J., Loughlin, G., Bermejo, J., Sánchez-Margallo, F.M., Fernández-Avilés, F. "Noninvasive identification of epicardial ventricular tachycardia substrate by magnetic resonance-based signal intensity mapping". Heart Rhythm, 11(8):1456-1464. Aug. 2014 (doi: 10.1016/j.hrthm.2014.04.022).
Esteban, O., Wollny, G., Gorthi, S., Ledesma-Carbayo, M.J., Thiran, J.P., Santos, A., Bach-Cuadra, M. "MBIS: Multivariate Bayesian Image Segmentation". Comput. Meth. Programs Biomed., 115(2):76-94. Jul. 2014 (doi: 10.1016/j.cmpb.2014.03.003).
Castro-González, C., Luengo-Oroz, M.A., Duloquin, L., Savy, T., Rizzi, B., Desnoulez, S., Doursat, R., Kergosien, Y.L., Ledesma-Carbayo, M.J., Bourgine, P., Peyriéras, N., Santos, A. "A Digital Framework to Build, Visualize and Analyze a Gene Expression Atlas with Cellular Resolution in Zebrafish Early Embryogenesis". PLoS Comput. Biol., 10(6):e1003670. Jun. 2014 (doi: 10.1371/journal.pcbi.1003670).
Maška, M., Ulman, V., Svoboda, D., Matula, P., Matula, P., Ederra, C., Urbiola, A., España, T., Venkatesan, S., Balak, D.M.W., Karas, P., Bolcková, T., Štreitová, M., Carthel, C., Coraluppi, S., Harder, N., Rohr, K., Magnusson, K.E.G., Jaldén, J., Blau, H.M., Dzyubachyk, O., Krížek, P., Hagen, G.M., Pastor-Escuredo, D., Jimenez-Carretero, D., Ledesma-Carbayo, M.J., Muñoz-Barrutia, A., Meijering, E., Kozubek, M., Ortiz-de-Solorzano, C. "A benchmark for comparison of cell tracking algorithms". Bioinformatics, 30(11):1609-1617. Jun. 2014 (doi: 10.1093/bioinformatics/btu080).
Fernandez-de-Manuel, L., Wollny, G., Kybic, J., Jimenez-Carretero, D., Tellado, J.M., Ramon, E., Desco, M., Santos, A., Pascau, J., Ledesma-Carbayo, M.J. "Organ-Focused Mutual Information for Nonrigid Multimodal Registration of Liver CT and Gd-EOB-DTPA-enhanced MRI". Med. Image Anal., 18(1):22-35. Jan. 2014 (doi: 10.1016/j.media.2013.09.002).
Sportelli, G., Belcari, N., Camarlinhi, N., Cirrone, G.A.P., Cuttone, G., Ferretti, S., Kraan, A., Ortuño, J.E., Romano, F., Santos, A., Straub, K., Tramontana, A., Del Guerra, A., Rosso, V. "First full-beam PET acquisitions in proton therapy with a modular dual-head dedicated system". Phys. Med. Biol., 59(1):43-60. Jan. 2014 (doi: 10.1088/0031-9155/59/1/43).

2013

Atienza, F., Arenal, A., Pérez-David, E., Elízaga, J., Ortuño, J.E., Ledesma-Carbayo, M.J., Sánchez-Quintana, D., Fernández-Avilés, F. "New Diagnostic and Therapeutic Approaches to Treat Ventricular Tachycardias Originating at the Summit of the Left Ventricle: Role of Merged Hemodynamic-MRI Imaging and Alternative Ablation Sources". Circ.-Arrhythmia Electrophysiol., 6(6):e80-e84. Dec. 2013 (doi: 10.1161/CIRCEP.113.000430). Editor's perspective on this paper.
Ortuño, J.E., Ledesma-Carbayo, M.J., Simões, R.V., Candiota, A.P., Arús, C., Santos, A. "DCE@urLAB: a dynamic contrast-enhanced MRI pharmacokinetic analysis tool for preclinical data". BMC Bioinformatics, 14:316. Nov. 2013 (doi: 10.1186/1471-2105-14-316).
García-Álvarez, A., Fernández-Friera, L., García-Ruiz, J.M., Nuño-Ayala, M., Pereda, D., Fernández-Jiménez, R., Guzmán, G., Sanchez-Quintana, D., Alberich-Bayarri, A., Pastor-Escudero, D., Sanz-Rosa, D., García-Prieto, J., Gonzalez-Mirelis, J.G., Pizarro, G., Jimenez-Borreguero, L.J., Fuster, V., Sanz, J., Ibáñez, B. "Noninvasive Monitoring of Serial Changes in Pulmonary Vascular Resistance and Acute Vasodilator Testing Using Cardiac Magnetic Resonance". J. Am. Coll. Cardiol., 62(17):1621-1631. Oct. 2013 (doi: 10.1016/j.jacc.2013.07.037).
Mikut, R., Dickmeis, T., Driever, W., Geurts, P., Hamprecht, F.A., Kausler, B.X., Ledesma-Carbayo, M.J., Marée, R., Mikula, K., Pantazis, P., Ronneberger, O., Santos, A., Stotzka, R., Strähle, U., Peyriéras, N. "Automated Processing of Zebrafish Imaging Data: A Survey". Zebrafish, 10(3):401-421. Sep. 2013 (doi: 10.1089/zeb.2013.0886).
Morrocchi, M., Marcatili, S., Belcari, N., Bisogni, M.G., Collazuol, G., Ambrosi, G., Santoni, C., Corsi, F., Foresta, M., Marzocca, C., Matarrese, G., Sportelli, G., Guerra, P., Santos, A., Del Guerra, A. "Proof of concept of an imaging system demonstrator for PET applications with SiPM". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 720:67-69. Aug. 2013 (doi: 10.1016/j.nima.2012.12.033).
Rosso, V., Battistoni, G., Belcari, N., Camarlinghi, N., Ferrari, A., Ferretti, S., Kraan, A., Mairani, A., Marino, N., Ortuño, J.E., Pullia, M., Sala, P., Santos, A., Sportelli, G., Straub K., Del Guerra, A. "A new PET prototype for proton therapy: comparison of data and Monte Carlo simulations". J. Instrum., 8(3):C03021. Mar. 2013 (doi: 10.1088/1748-0221/8/03/C03021).
Martí Fuster, B., Esteban, O., Planes, X., Aguiar, P., Crespo, C., Falcon, C., Wollny, G., Rubí Sureda, S., Setoain, X., Frangi, A.F., Ledesma, M.J., Santos, A., Pavía, J., Ros, D. "FocusDET, A New Toolbox for SISCOM Analysis. Evaluation of the Registration Accuracy Using Monte Carlo Simulation". Neuroinformatics, 11(1):77-89. Jan. 2013 (doi: 10.1007/s12021-012-9158-x).
Sportelli, G., Ortuño, J.E., Vaquero, J.J., Desco, M., Santos, A. "Massively parallelizable list-mode reconstruction using a Monte Carlo-based elliptical Gaussian model". Med. Phys., 40(1):012504. Jan. 2013 (doi:10.1118/1.4771936).

2012

Luengo-Oroz, M.A., Arranz, A., Frean, J. "Crowdsourcing Malaria Parasite Quantification: An Online Game for Analyzing Images of Infected Thick Blood Smears". J. Med. Internet Res., 14(6):e167. Nov. 2012 (doi: 10.2196/jmir.2338).
Morrocchi, M., Marcatili, S., Belcari, N., Bisogni, M.G., Collazuol, G., Ambrosi, G., Corsi, F., Foresta, M., Marzocca, C., Matarrese, G., Sportelli, G., Guerra, P., Santos, A., Del Guerra, A. "Timing Performances of a Data Acquisition System for Time of Flight PET". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 695:210-212. Dec. 2012 (doi: 10.1016/j.nima.2011.11.073).
Luengo-Oroz, M.A., Pastor-Escuredo, D., Castro-Gonzalez, C., Faure, E., Savy, T., Lombardot, B., Rubio-Guivernau, J.L., Duloquin, L., Ledesma-Carbayo, M.J., Bourgine, P., Peyrieras, N., Santos, A. "3D+t Morphological Processing: Applications to Embryogenesis Image Analysis". IEEE Trans. Image Process., 21(8):3518-3530. Aug. 2012 (doi: 10.1109/TIP.2012.2197007).
Wollny, G., Kellman, P., Santos, A., Ledesma-Carbayo, M.J. "Automatic motion compensation of free breathing acquired myocardial perfusion data by using independent component analysis". Med. Image Anal., 16(5):1015-1028. Jul. 2012 (doi: 10.1016/j.media.2012.02.004).
Castro-González, C., Ledesma-Carbayo, M.J., Peyriéras, N., Santos, A. "Assembling Models of Embryo Development: Image Analysis and the Construction of Digital Atlases". Birth Defects Res. Part C-Embryo Today-Rev., 96(2):109-120. Jun. 2012 (doi: 10.1002/bdrc.21012).
Arenal, A., Hernández, J., Pérez-David, E., Rubio-Guivernau, J.L., Ledesma-Carbayo, M.J., Fernández-Avilés, F. "Do the spatial characteristics of myocardial scar tissue determine the risk of ventricular arrhythmias?". Cardiovasc. Res., 94(2):324-332. May 2012 (doi: 10.1093/cvr/cvs113).
Luengo-Oroz, M.A., Rubio-Guivernau, J.L., Faure, E., Savy, T., Duloquin, L., Olivier, N., Pastor, D., Ledesma-Carbayo, M.J., Débarre, D., Bourgine, P., Beaurepaire, E., Peyriéras, N., Santos, A. "Methodology for Reconstructing Early Zebrafish Development From In Vivo Multiphoton Microscopy". IEEE Trans. Image Process., 21(4):2335-2340. Apr. 2012 (doi: 10.1109/TIP.2011.2177911).
Wallach, D., Lamare, F., Kontaxakis, G., Visvikis, D. "Super-Resolution in Respiratory Synchronized Positron Emission Tomography". IEEE Trans. Med. Imaging, 31(2):438-448. Feb 2012 (doi: 10.1109/TMI.2011.2171358).
Rubio-Guivernau, J.L., Gurchenkov, V., Luengo-Oroz, M.A., Duloquin, L., Bourgine, P., Santos, A., Peyrieras, N., Ledesma-Carbayo, M.J. "Wavelet-based image fusion in multi-view three-dimensional microscopy". Bioinformatics, 28(2):238-245. 15 Jan. 2012 (doi: 10.1093/bioinformatics/BTR609).

2011

Marcatili, S., Belcari, N., Bisogni, M.G., Collazuol, G., Ambrosi, G., Corsi, F., Foresta, M., Marzocca, C., Matarrese, G., Sportelli, G., Guerra, P., Santos, A., Del Guerra, A. "Development and characterization of a modular acquisition system for a 4D PET block detector". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 659(1):494-498. Dec. 2011 (doi: 10.1016/j.nima.2011.08.042).
Luengo-Oroz, M.A., Ledesma-Carbayo, M.J., Peyriéras, N., Santos, A. "Image Analysis for Understanding Embryo Development: A Bridge from Microscopy to Biological Insights". Curr. Opin. Genet. Dev., 21(5):630-637. Oct. 2011 (doi: 10.1016/j.gde.2011.08.001).
Sportelli, G., Belcari, N., Guerra, P., Santos, A. "Low-resource synchronous coincidence processor for positron emission tomography". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 648:S199-S201. Aug. 2011 (doi: 10.1016/j.nima.2010.11.170).
Del Guerra, A., Belcari, N., Bisogni, M.G., Corsi, F., Foresta, M., Guerra, P., Marcatili, S., Santos, A., Sportelli, G. "Silicon Photomultipliers (SiPM) as novel photodetectors for PET". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 648:S232-S235. Aug. 2011 (doi: 10.1016/j.nima.2010.11.128).
Sportelli, G., Belcari, N., Guerra, P., Spinella, F., Franchi, G., Attanasi, F., Moehrs, S., Rosso, V., Santos, A., Del Guerra, A. "Reprogrammable Acquisition Architecture for Dedicated Positron Emission Tomography". IEEE Trans. Nucl. Sci., 58(3):695-702. Jun. 2011 (doi: 10.1109/TNS.2011.2113193).
Perez-David, E., Arenal, A., Rubio-Guivernau, J.L., del Castillo, R., Atea, L., Arbelo, E., Caballero, E., Celorrio, V., Datino, T., Gonzalez-Torrecilla, E., Atienza, F., Ledesma-Carbayo, M.J., Bermejo, J., Medina, A., Fernandez-Aviles, F. "Noninvasive Identification of Ventricular Tachycardia-Related Conducting Channels Using Contrast-Enhanced Magnetic Resonance Imaging in Patients With Chronic Myocardial Infarction". J. Am. Coll. Cardiol., 57(2):184-194. 11 Jan. 2011 (doi: 10.1016/j.jacc.2010.07.043). Editorial comment on this article.
Sampath, S., Derbyshire, J.A., Ledesma-Carbayo, M.J., McVeigh, E.R. "Imaging left ventricular tissue mechanics and hemodynamics during supine bicycle exercise using a combined tagging and phase-contrast MRI pulse sequence". Magn. Reson. Med., 65(1):51-59. Jan. 2011 (doi: 10.1002/mrm.22668).

2010

Aguiar, P., Rafecas, M., Ortuño, J.E., Kontaxakis, G., Santos, A., Pavía, J., Ros, D. "Geometrical and Monte Carlo projectors in 3D PET reconstruction". Med. Phys., 37(11):5691-5702. Nov. 2010 (doi: 10.1118/1.3501884).
Carranza-Herrezuelo, N., Bajo, A., Sroubek, F., Santamarta, C., Cristobal, G., Santos, A., Ledesma-Carbayo, M.J. "Motion estimation of tagged cardiac magnetic resonance images using variational techniques". Comput. Med. Imaging Graph., 34(6):514-522. Sep. 2010 (doi: 10.1016/j.compmedimag.2010.03.002).
Gaitanis, A., Kontaxakis, G., Spyrou, G., Panayiotakis, G., Tzanakos, G. "Studying the properties of the updating coefficients in the OSEM algorithm for iterative image reconstruction in PET". Comput. Meth. Programs Biomed., 99(3):219-229. Sep. 2010 (doi: 10.1016/j.cmpb.2009.11.011).
Olivier, N., Luengo-Oroz, M.A., Duloquin, L., Faure, E., Savy, T., Veilleux, I., Solinas, X., Débarre, D., Bourgine, P., Santos, A., Peyriéras, N., Beaurepaire, E. "Cell Lineage Reconstruction of Early Zebrafish Embryos Using Label-Free Nonlinear Microscopy". Science, 329(5994):967-971. 20 Aug. 2010 (doi: 10.1126/science.1189428). (Supporting online material). Research highlight in Nature.
Wollny, G., Ledesma-Carbayo, M.J., Kellman, P., Santos, A. "Exploiting Quasi-Periodicity in Motion Correction of Free-Breathing Myocardial Perfusion MRI". IEEE Trans. Med. Imaging, 29(8):1516-1527. Aug. 2010 (doi: 10.1109/TMI.2010.2049270).
Ortuño, J.E., Kontaxakis, G., Rubio, J.L., Guerra, P., Santos, A. "Efficient methodologies for system matrix modelling in iterative image reconstruction for rotating high resolution PET". Phys. Med. Biol., 55(7):1833-1861. Apr. 2010 (doi: 10.1088/0031-9155/55/7/004).
Gaitanis, A., Kontaxakis, G., Spyrou, G., Panayiotakis, G., Tzanakos, G. "PET image reconstruction: A stopping rule for the MLEM algorithm based on properties of the updating coefficients". Comput. Med. Imaging Graph., 34(2):131-141. Mar. 2010 (doi: 10.1016/j.compmedimag.2009.07.006).
Luengo-Oroz, M.A., Faure, E., Angulo, J. "Robust iris segmentation on uncalibrated noisy images using mathematical morphology". Image Vision Comput., 28(2):278-284. Feb. 2010 (doi: 10.1016/j.imavis.2009.04.018).

2009

Schaap, M., Metz, C.T., van Walsum, T., van der Giessen, A.G., Weustink, A.C., Mollet, N.R., Bauer, C., Bogunović, H., Castro, C., Deng, X., Dikici, E., O’Donnell, T., Frenay, M., Friman, O., Hernández Hoyos, M., Kitslaar, P.H., Krissian, K., Kühnel, C., Luengo-Oroz, M.A., Orkisz, M., Smedby, Ö., Styner, M., Szymczak, A., Tek, H., Wang, C., Warfield, S.K., Zambal, S., Zhang, Y., Krestin, G.P., Niessen, W.J. "Standardized Evaluation Methodology and Reference Database for Evaluating Coronary Artery Centerline Extraction Algorithms", Med. Image Anal., 13(5):701-714. Oct. 2009 (doi: 10.1016/j.media.2009.06.003).
Guerra, P., Santos, A, Darambara, D.G. "An investigation of performance characteristics of a pixellated room-temperature semiconductor detector for medical imaging". J. Phys. D-Appl. Phys., 42:175101 (11pp). Sep. 2009 (doi: 10.1088/0022-3727/42/17/175101).
Lage, E., Vaquero, J.J., Sisniega, A., España, S., Tapias, G., Abella, M., Rodríguez-Ruano, A., Ortuño, J.E., Udías, A., Desco, M. "Design and performance evaluation of a coplanar multimodality scanner for rodents imaging". Phys. Med. Biol., 54(18):5427-5441. Sep. 2009 (doi: 10.1088/0031-9155/54/18/005).
Luengo-Oroz, M.A., Angulo, J. "Cyclic Mathematical Morphology in Polar-Logarithmic Representation". IEEE Trans. Image Process., 18(5):1090-1096. May 2009 (doi: 10.1109/TIP.2009.2013078).
Zöllner, F.G., Sance, R., Rogelj, P., Ledesma-Carbayo, M.J., Rørvik, J., Santos, A., Lundervold, A. "Assessment of 3D DCE-MRI of the kidneys using non-rigid image registration and segmentation of voxel time courses". Comput. Med. Imaging Graph., 33(3):171-181. Apr. 2009 (doi: 10.1016/j.compmedimag.2008.11.004).
Iriarte, I., Sorzano, C.O.S., Carazo, J.M., Rubio, J.L., Marabini, R. "A theoretical model for EM-ML reconstruction algorithms applied to rotating PET scanners". Phys. Med. Biol., 54(7):1909-1934. Apr. 2009 (doi: 10.1088/0031-9155/54/7/004).
Megías, D., Marrero, R., del Peso, B.M., García, M.A., Bravo-Cordero, J.J., García-Grande, A., Santos, A., Montoya, M.C. "Novel lambda FRET spectral confocal microscopy imaging method". Microsc. Res. Tech., 72(1):1-11. Jan. 2009 (doi: 10.1002/jemt.20633).

2008

Guerra, P., Ortuño, J.E., Kontaxakis, G., Ledesma-Carbayo, M.J., Vaquero, J.J., Desco, M., Santos, A. "Real-Time Digital Timing in Positron Emission Tomography". IEEE Trans. Nucl. Sci., 55(5):2531-2540. Oct. 2008 (doi: 10.1109/TNS.2008.2005896).
Guerra, P., Santos, A., Darambara, D. "Development of a simplified simulation model for performance characterization of a pixellated CdZnTe multimodality imaging system". Phys. Med. Biol., 53(4):1099-1113. Feb. 2008 (doi: 10.1088/0031-9155/53/4/019).
Ledesma-Carbayo, M.J., Derbyshire, J.A., Sampath, S., Santos, A., Desco, M., McVeigh, E.R. "Unsupervised estimation of myocardial displacement from tagged MR sequences using non-rigid registration". Magn. Reson. Med., 59(1):181-189. Jan. 2008 (doi: 10.1002/mrm.21444).

2007

Mahía, P., Ledesma-Carbayo, M.J., Verdugo, V., Pérez-David, E., Santos, A., Moreno, M., Desco, M., García-Fernández, M.A. "Radial versus Longitudinal Myocardial Deformation from Gray-Scale Echocardiography". Ultrasound Med. Biol., 33(11):1699-1705. Nov. 2007 (doi: 10.1016/j.ultrasmedbio.2007.05.010).
Pavlopoulos, S., Thireou, T., Kontaxakis, G., Santos, A. " Analysis and Interpretation of Dynamic FDG-PET Oncological Studies using Data Reduction Techniques". Biomed. Eng. Online, 6:36. Oct. 2007 (doi: 10.1186/1475-925X-6-36).
Lamare, F., Ledesma Carbayo, M.J., Cresson, T., Kontaxakis, G., Santos, A., Cheze Le Rest, C., Reader, A.J., Visvikis, D. "List-mode-based Reconstruction for Respiratory Motion Correction in PET using Non-rigid Body Transformations". Phys. Med. Biol., 52:5187-5204. 2007 (doi: 10.1088/0031-9155/52/17/006).
Ledesma-Carbayo, M.J., Kellman, P., Arai, A.E., McVeigh, E.R. "Motion corrected free-breathing delayed enhancement imaging of myocardial infarction using non-rigid registration". J. Magn. Reson. Imaging, 26:184-190. 2007 (doi: 10.1002/jmri.20957).
Guerra, P., Rubio, J.L., Ortuño, J.E., Kontaxakis, G., Ledesma, M.J., Santos, A. "Performance Analysis of a Low-Cost Small Animal PET/SPECT scanner". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 571(1-2):98-101. Feb. 2007 (doi: 10.1016/j.nima.2006.10.038).

2006

Guerra, P., Rubio, J.L., Kontaxakis, G., Ortuño, J.E., Ledesma, M.J., Santos, A. "Programmable electronics for low-cost small animal PET/SPET imaging". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 569(2):162-166. Dec. 2006 (doi: 10.1016/j.nima.2006.08.042).
Visvikis, D., Lefevre, T., Lamare, F., Kontaxakis, G., Santos, A., Darambara, D. "Monte Carlo based performance assessment of different animal PET architectures using pixellated CZT detectors". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 569(2):225-229. Dec. 2006 (doi: 10.1016/j.nima.2006.08.050).
Thireou, T., Rubio Guivernau, J.L., Atlamazoglou, V., Ledesma, M.J., Pavlopoulos, S., Santos, A., Kontaxakis, G. "Evaluation of data reduction methods for dynamic PET series based on Monte Carlo techniques and the NCAT phantom". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 569(2):389-393. Dec. 2006 (doi: 10.1016/j.nima.2006.08.112).
Ortuño, J.E., Guerra-Gutiérrez, P., Rubio, J.L., Kontaxakis, G., Santos, A. "3D-OSEM iterative image reconstruction for high resolution PET using precalculated system matrix". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 569(2):440-444. Dec. 2006 (doi: 10.1016/j.nima.2006.08.067).
Kontaxakis, G., Pozo, M.A., Ohl., R., Visvikis, D., Sachpazidis, I., Ortega, F., Guerra, P., Cheze-Le Rest, C., Selby, P., Pan, L., Diaz, J., Dimitrakopoulou-Strauss, A., Santos, A., Strauss, L., Sakas, G. "European health telematics networks for positron emission tomography". Nucl. Instrum. Methods Phys. Res. Sect. A-Accel. Spectrom. Dect. Assoc. Equip., 569(2):626-630. Dec. 2006 (doi: 10.1016/j.nima.2006.08.119).
Guerra, P., Espinosa, J., Ortuño, J.E., Kontaxakis, G., Vaquero, J.J., Desco, M., Santos, A. "New Embedded Digital Front-End for High Resolution PET Scanner". IEEE Trans. Nucl. Sci., 53(3):770-775, Jun. 2006 (doi: 10.1109/TNS.2006.874800).
Guerra, P., Ortuño, J.E., Vaquero, J.J., Kontaxakis, G., Desco, M., Santos, A. "Modeling the Acquisition Front-End in High Resolution Gamma-Ray Imaging". IEEE Trans. Nucl. Sci., 53(3):1150-1155, Jun. 2006 (doi: 10.1109/TNS.2006.875065).
Thireou, T., Pavlopoulos, S., Kontaxakis, Santos, A. "Blind Source Separation for the Computational Analysis of Dynamic Oncological PET Studies". Oncol. Rep., 15:1007-1012. May 2006.
Kontaxakis, G., Visvikis, D., Ohl, R., Sachpazidis, I., Suarez, J.P., Selby, P., Cheze-Le Rest, C., Santos, A., Ortega, F., Diaz, J., Pan, L., Strauss, L., Dimitrakopoulou-Strauss, A., Sakas, G., Pozo, M.A. "Integrated telemedicine applications and services for oncological positron emission tomography". Oncol. Rep., 15:1091-1100. May 2006.
Perez-David, E., Garcia-Fernandez, M.A., Quiles, J., Mahia, P., Lopez-Sendon, J.L., Lopez de Sa, E., Ledesma, M.J., Moreno, M., Desco, M., Garcia, E. "Usefulness of quantitative myocardial contrast echocardiography for prediction of ventricular function recovery after myocardial infarction treated with primary angioplasty". Heart, 92(5):693-694. May 2006 (doi: 10.1136/hrt.2005.071357).
Ledesma-Carbayo, M.J., Mahia-Casado, P., Santos, A., Perez-David, E., Garcia-Fernandez, M.A, Desco, M. "Cardiac Motion Analysis from Ultrasound Sequences using Nonrigid Registration Validation against Doppler Tissue Velocity". Ultrasound Med. Biol., 32(4):483-490. Apr. 2006 (doi: 10.1016/j.ultrasmedbio.2005.12.006).

2005

Wang, X.H., Istepanian, R.S., Geake, T., Hayes, J., Desco, M., Kontaxakis, G., Santos, A., Prentza, A., Pavlopoulos, S. "A Feasibility Study of a Personalised, Internet-based Compliance System for Chronic Disease Management". Telemed. J. e-Health, 11(5):559-566. Oct. 2005 (doi: 10.1089/tmj.2005.11.559).
Ledesma-Carbayo, M.J., Kybic, J., Desco, M., Santos, A., Sühling, M., Hunziker, P., Unser, M. "Spatio-Temporal Nonrigid Registration for Ultrasound Cardiac Motion Estimation". IEEE Trans. Med. Imaging, 24(9):1113-1126. Sep. 2005 (doi: 10.1109/TMI.2005.852050).
Pérez-David,E., García-Fernández, M.A., Ledesma, M.J., Malpica, N., López-Fernández, T., Santos, A., Moreno, M., Antoranz, J.C., Desco, M. "Age-related intramyocardial patterns in healthy subjects evaluated with Doppler tissue imaging". Eur. J. Echocardiogr., 6(3):175-185. Jun. 2005 (doi: 10.1016/j.euje.2004.08.007).
Thireou, T., Kontaxakis, G., Strauss, L.G., Dimitrakopoulou-Strauss, A., Pavlopoulos, S., Santos, A. "Feasibility study of the use of similarity maps in the evaluation of oncological dynamic positron emission tomography images". Med. Biol. Eng. Comput., 43(1):23-32. 2005 (doi: 10.1007/BF02345119).
Molina V., Gispert, J.D., Reig, S., Sanz, J., Pascau, J., Santos, A., Desco, M., Palomo, T. "Cerebral metabolic changes induced by clozapine in schizophrenia and related to clinical improvement". Psychopharmacology, 178(1):17-26. 2005 (doi: 10.1007/s00213-004-1981-9).

2004

Pérez, P., Santos, A. "Undersampling to Acquire Nuclear Magnetic Resonance Images". Med. Eng. Phys., 26(6):523-529. Jun. 2004 (doi: 10.1016/j.medengphy.2004.01.008).
Malpica, N., Santos, A., Zuluaga, M.A., Ledesma, M.J., Pérez, E., García-Fernández, M.A., Desco, M. "Tracking of regions-of-interest in myocardial contrast echocardiography". Ultrasound Med. Biol., 30(3):303-309. Mar. 2004 (doi: 10.1016/j.ultrasmedbio.2003.11.007).

2003

García-Fernández, M.A., Bermejo, J., Pérez-David, E., López-Fernández, T., Ledesma, M.J., Caso, P., Malpica, N., Santos, A., Moreno, M., Desco, M. "New Techniques for the Assessment of Regional Left Ventricular Wall Motion". Echocardiography, 20(7):659-672. Oct. 2003 (doi: 10.1046/j.1540-8175.2003.t01-1-03036.x).
Malpica, N., Ortuño, J.E., Santos, A. "A multichannel watershed-based algorithm for supervised texture segmentation". Pattern Recogn. Lett., 24(9-10):1545-1554. Jun. 2003 (doi: 10.1016/S0167-8655(02)00393-8).
Molina, V., Gispert, J.D., Reig, S., Sanz, J., Pascau, J., Santos, A., Palomo, T., Desco, M., "Cerebral Metabolism and Risperidone Treatment in Schizophrenia". Schizophr. Res., 60(1):1-7. Mar. 2003 (doi: 10.1016/S0920-9964(02)00199-8).
Desco, M., Gispert, J.D., Reig, S., Sanz, J., Pascau, J., Sarramea, F., Benito, C., Santos, A., Palomo, T., Molina, V., "Cerebral Metabolic Patterns in Chronic and Recent-onset Schizophrenia". Psychiatry Res. Neuroimaging, 122(2):125-135. Feb. 2003 (doi: 10.1016/S0925-4927(02)00124-5).
Thireou, T., Strauss, L.G., Dimitrakopoulou-Strauss, A., Kontaxakis, G., Pavlopoulos, S., Santos, A. "Performance Evaluation of Principal Component Analysis in Dynamic FDG-PET Studies of Recurrent Colorectal Cancer". Comput. Med. Imaging Graph., 27(1):43-51. Jan. 2003 (doi: 10.1016/S0895-6111(02)00050-2).
Malpica, N., Santos, A., Tejedor, A., Torres, A., Castilla, M., García-Barreno, P., Desco, M. "Automatic quantification of viability in epithelial cell cultures by texture analysis". J. Microsc., 209(1):34-40. Jan. 2003 (doi: 10.1046/j.1365-2818.2003.01094.x).

2002

Desco, M., Ledesma-Carbayo, M.J., Pérez, E., Santos, A., Antoranz, J.C., Malpica, N., Marcos-Alberca, P., García-Fernández, M.A. "Assessment of Normal and Ischaemic Myocardium by Quantitative M-mode Tissue Doppler Imaging". Ultrasound Med. Biol., 28(5):561-569. May. 2002 (doi: 10.1016/S0301-5629(02)00496-9).
Kontaxakis, G., Strauss, L.G., Thireou, T., Ledesma-Carbayo, M.J., Santos, A., Pavlopoulos, S.A., Dimitrakopoulou-Strauss, A. "Iterative Image Reconstruction for Clinical PET Using Ordered Subsets, Median Root Prior and a Web-based Interface". Mol. Imag. Biol., 4(3):219-231. May. 2002 (doi: 10.1016/S1536-1632(02)00004-5).
Marcos-Alberca, P., García-Fernández, M.A., Ledesma, M.J, Malpica, N., Santos, A., Moreno, M., Bermejo, J., Antoranz, J.C., Desco, M. "Intramyocardial analysis of regional systolic and diastolic function in ischemic heart disease with Doppler tissue imaging: Role of the different myocardial layers". J. Am. Soc. Echocardiogr., 15(2):99-108. Feb. 2002 (doi: 10.1067/mje.2002.120634).

2001

Pérez, P., Santos, A., Vaquero, J.J. "Potential Use of the Undersampling Technique in the Acquisition of Nuclear Magnetic Resonance Signals". Magn. Reson. Mat. Phys. Biol. Med., 13(2):109-117. Oct. 2001 (doi: 10.1016/S1352-8661(01)00137-5).
Desco, M., Hernández, J.A., Santos, A., Brammer, M. "Multiresolution Analysis in fMRI: Sensitivity and Specificity in the Detection of Brain Activation" Hum. Brain Mapp., 14(1):16-27. Sep. 2001 (doi: 10.1002/hbm.1038).
Vaquero, J.J., Desco, M., Pascau J., Santos, A., Lee, I., Seidel, J., Green, M.V. "PET, CT and MR Image Registration of the Rat Brain and Skull" IEEE Trans. Nucl. Sci., 48(4):1440-1445. Aug. 2001 (doi: 10.1109/23.958376).
Martin-Loeches, M., Molina, V., Muñoz, F., Hinojosa, J.A., Reig, S., Desco, M., Benito, C., Sanz, J., Gabiri, A., Sarramea, F., Santos, A., Palomo, T. "P300 amplitude as a possible correlate of frontal degeneration in Schizophrenia" Schizophr. Res., 49(1-2):121-128. Apr. 2001 (doi: 10.1016/S0920-9964(00)00125-0).

2000

Santos, A., Young, I.T. "Model-Based Resolution: Applying the Theory in Quantitative Microscopy" Appl. Optics, 39(17):2948 - 2958. Jun. 2000 (doi: 10.1364/AO.39.002948).

1999

Ruiz-Cabello, J., Carrero-Gonzalez, B., Aviles, P., Santisteban, C., Mendez, R.J., Ferreiros, J., Malpica, N., Santos, A., Gargallo-Viola, D., Regadera, J. "Magnetic resonance imaging in the evaluation of inflammatory lesions in muscular and soft tissues: An experimental infection model induced by Candida Albicans" Magn. Reson. Imaging 17(9):1327-1334. Nov. 1999 (doi).

1998

Ortiz, C., Santos, A., Vallcorba, I., García-Sagredo, J.M., del Pozo, F. "Automated FISH Spot Counting in Interphase Nuclei: Statistical Validation and Data Correction". Cytometry, 31(2):93-99. Feb. 1998 (doi).
Rivera, M., Vaquero, J.J., Santos, A., Ruiz-Cabello, J., del Pozo, F. "MRI visualization of small structures using improved surface coils". Magn. Reson. Imaging, 16(2):157-166. Feb. 1998 (doi).

1997

Desco, M., López, J., Calvo, F.A., Santos, A., Santos, J.A., del Pozo, F., García-Barreno, P. "Simulated Surgery on Computed Tomography and Magnetic Resonance Images: An Aid for Intraoperative Radiotherapy". Comput. Aided Surg. 2(6):333-339. 1997 (doi).
Santos, A., Ortiz, C., Vaquero, J.J., Peña, J.M., Malpica, N., del Pozo, F. "Evaluation of Autofocus Functions in Molecular Cytogenetic Analysis". J. Microsc., 188(3):264-272. Dec. 1997 (doi).
Malpica, N., Ortiz, C., Vaquero, J.J., Santos, A., Vallcorba, I., García-Sagredo, J.M., del Pozo, F. "Applying Watershed Algorithms to the Segmentation of Clustered Nuclei". Cytometry, 28(4):289-297. Aug. 1997 (doi).
Vaquero, J.J., Santos, A., Pérez, S., del Pozo, F. "Efficient computation of amplitude and phase maps in nuclear medicine equilibrium gated cardiac studies". IEEE Trans. Biomed. Eng. 44(3):213-215. Mar. 1997 (doi).